Monthly Archives: August 2012

The role of heterosis in Jatropha breeding

Today I want to take a closer look at the relevance of heterosis in Jatropha breeding. Heterosis or hybrid vigor, or outbreeding enhancement is “the increase in growth, size, fecundity, function, yield, or other characters in hybrids over those of the parents”. Find more information on heterosis on Wikipedia.

Heterosis effect can be forecasted based on this genetic variability map

Almost 3 years ago we started all our breeding efforts from this genetic variability map created by our friend and advisor Tommaso Barbi working at Geneticlab in Trieste, Italy at the time.

The parental accession base of the Bionic Palm Jatropha breeding program is not a 100% overlap, but we do have quite a significant number of key accessions in our program which are also shown in the map while many others can be linked to one of the clusters genetically or phenotypically.

Simply speaking, crossing more distant accessions from the map increases the likelyhood of significant variability in the hybrids genetically expressing itself in a higher degree of heterozygosity. Another crazy insider term from molecular biology, I know. Heterozygosity describes the amount of differences between corresponding alleles in a DNA sequence. Homozygosity is the term for the opposite situation of corresponding alleles being similar.

It has been found that heterozygosity usually correlates with strong heterosis effects. In the map above a cross between more distant accessions leads to a higher heterozygosity in the resulting hybrids and therefore higher levels of heterosis can be expected. Only about 6 months ago we started to be able to observe different heterosis levels in our hybrids.

The molecular basis of heterosis is still not fully understood. Current believe among scientists is that healthy alleles across numerous genes from one parent compensate for dysfunctional alleles at those genes from the other, distantly related parent (and vice versa for a second set of genes). A plant exhibiting a high level of heterosis would thus be the genetically most healthy.

This explanation fully corresponds with the opposite effect of inbreeding depression. Here parts of the parental alleles become dysfunctional or silenced because there is too little genetic difference between the two parents. The very strong expression of heterosis we observe when crossing a semi-commercial Jatropha accession from Africa or Asia with a wild accession from the center of origin therefore suggests at least a mild inbreeding depression on a very narrow genetic variability in the germplasm originally introduced by the Portuguese seafarers when they first distributed Jatropha around the world.

So far observations are limited to leave size and, at a smaller extent, stem diameter. Over the coming month fruit and seed sizes will become visible too. With the leaves we quite commonly measure lengths of up to 20cm where the usual average is no more than 10cm.

The following picture demonstrates the phenomenon very clearly.

Heterosis in Jatropha breeding can be observed in this intraspecific hybrid plant

The small plant in the front germinated in November 2011 and is a cross of 2 accessions with distinct phenotypic differences but, genetically very similar, they are both from the upper left cluster in the map. The much larger plant behind in the center germinated in March 2012, 5 months later, and represents a cross between the upper and lower left hand clusters. Average leave length is almost double that of the plant in the front and of course the overall size is significantly different.

 A heterosis effect is also visible in many of our interspecific hybrids, but notably less so in those which have a very short seed-to-seed time of less than six months. A behavior which can be attributed to negative heterosis (=shorter seed-to-seed cycle). Interspecific heterosis can be observed in the following picture.

Heterosis in Jatropha breeding

The plant on the far left hand side shows by far the most dramatic heterosis effects. Followed by the next 2 plants to the right with heterosis also clearly noticeable. All 3 happen to be non-toxic interspecific hybrids. Then we see an early flowering and fruiting interspecific hybrid exhibiting no visible heterosis. Similarly at last, on the far right some regular Jatropha can be seen. From left to right we go from high level heterosis to none at all.

In front a rare chili pepper can be seen which is currently tested for drought resistance.

The findings described in this post have been highly unexpected. We are currently waiting for the first seeds from plants exhibiting strong heterosis to mature so we can check seed weight and oil content. Based on the results we will have to decide if we are going to open up a new heterosis breeding route in addition to our current approaches.

Early BC1 collection

Jatropha hybrid backcrosses available for further breeding

Before our proof-of-concept phase officially came to an end on June 30th, 2012 we succeeded in taking our efforts to the next level. Our first Jatropha hybrid backcrosses have germinated and reached seedling stage by mid June. This achievement marks an enormously important step forward for the Bionic Palm Jatropha breeding program. 

Jatropha hybrid backcrosses exhibit enormous genetic variability even at the seedling stage

The above picture shows the huge variability among our earliest BC1 seedlings. Over the coming months this collection will grow into the hundreds. We aim for a BC1 population incorporating all of our original parental germplasm and most of its cross combinations. Thus we will gain the maximum possible genetic variability base which we can later draw from when we breed for truly superior commercially usable hybrids.

What we define as our BC1 population is the result of back-crossing interspecific Jatropha curcas x Jatropha integerima hybrids into our parental Jatropha curcas accessions.  This is a standard breeder’s approach if he wants to transfer specific traits (certain properties) from a related species into his species of interest. However, we are not into pedigree breeding at this time. Our primary aim is still to increase genetic variability of our population to the utmost possible.

We are looking for the greatest possible heterozygosity in these plants which can be assumed to be 100% in many cases. According to scientific research reports on the genetics of Jatropha this can only be achieved through an interspecific breeding route. While this kind of approach is very time consuming we do expect to gain a substantial shift in the Jatropha genetics.